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Empowering breast cancer proteomics with genomics with Dr. Jochen Schwenk

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Manage episode 364851590 series 3396598
Content provided by Dale Yuzuki and Olink Proteomics. All podcast content including episodes, graphics, and podcast descriptions are uploaded and provided directly by Dale Yuzuki and Olink Proteomics or their podcast platform partner. If you believe someone is using your copyrighted work without your permission, you can follow the process outlined here https://staging.podcastplayer.com/legal.

Welcome to Olink Proteomics in Proximity Podcast!

Below are some useful resources from this episode:

Highlighted pre-print article: Malarstig A, Grassman F, Dahl L, et al. Evaluation of Circulating Plasma Proteins in Breast Cancer: A Mendelian Randomization Analysis. ResearchSquare 2023.04.04. DOI: https://doi.org/10.21203/rs.3.rs-2749047/v1

Highlighted platform that was used to measure proteins in this study with a next-generation sequencing (NGS) readout (Olink® Explore 3072): https://olink.com/products-services/explore/

Learn more about the consortiums or cohorts mentioned in the podcast:

UK Biobank Pharma Proteomics Project (UKB-PPP) is currently performing one of the world’s largest scientific studies of blood protein biomarkers conducted to date: https://www.ukbiobank.ac.uk/learn-more-about-uk-biobank/news/uk-biobank-launches-one-of-the-largest-scientific-studies

Human Proteome Atlas (HPA) aims to map all human proteins using various omics technologies: https://www.proteinatlas.org/

SCALLOP consortium is a collaborative framework for discovery and follow-up of genetic associations with proteins on the Olink Proteomics platform: https://olink.com/our-community/scallop/

KARMA cohort is a prospective screening cohort for breast cancer in Sweden: https://karmastudy.org/ongoing-research/the-karma-cohort/

Swedish Twin Registry (referred as “Twin Gene cohort” in the podcast) is the largest of its kind, containing genetic information about ~87,000 twin pairs: https://ki.se/en/research/the-swedish-twin-registry

Additional published articles and books mentioned during the podcast:

Hood, Leroy and Price, Nathan. The Age of Scientific Wellness: Why the Future of Medicine Is Personalized, Predictive, Data-Rich, and in Your Hands, Cambridge, MA and London, England: Harvard University Press, 2023. https://doi.org/10.4159/9780674293465

Suhre K, McCarthy MI, Schwenk JM. Genetics meets proteomics: perspectives for large population-based studies. Nat Rev Genet. 2021 Jan;22(1):19-37. doi: 10.1038/s41576-020-0268-2. Epub 2020 Aug 28. PMID: 32860016. https://pubmed.ncbi.nlm.nih.gov/32860016/

Would you like to subscribe to the podcast on your favorite player or app? You can do so here:

Apple Podcasts: https://apple.co/3T0YbSm

Spotify Podcasts: https://open.spotify.com/show/2sZ2wxO...

Google Podcasts: https://podcasts.google.com/feed/aHR0...

Amazon Music: https://music.amazon.com/podcasts/d97...

Podcast Addict: https://podcastaddict.com/podcast/409...

Deezer:

  continue reading

25 episodes

Artwork
iconShare
 
Manage episode 364851590 series 3396598
Content provided by Dale Yuzuki and Olink Proteomics. All podcast content including episodes, graphics, and podcast descriptions are uploaded and provided directly by Dale Yuzuki and Olink Proteomics or their podcast platform partner. If you believe someone is using your copyrighted work without your permission, you can follow the process outlined here https://staging.podcastplayer.com/legal.

Welcome to Olink Proteomics in Proximity Podcast!

Below are some useful resources from this episode:

Highlighted pre-print article: Malarstig A, Grassman F, Dahl L, et al. Evaluation of Circulating Plasma Proteins in Breast Cancer: A Mendelian Randomization Analysis. ResearchSquare 2023.04.04. DOI: https://doi.org/10.21203/rs.3.rs-2749047/v1

Highlighted platform that was used to measure proteins in this study with a next-generation sequencing (NGS) readout (Olink® Explore 3072): https://olink.com/products-services/explore/

Learn more about the consortiums or cohorts mentioned in the podcast:

UK Biobank Pharma Proteomics Project (UKB-PPP) is currently performing one of the world’s largest scientific studies of blood protein biomarkers conducted to date: https://www.ukbiobank.ac.uk/learn-more-about-uk-biobank/news/uk-biobank-launches-one-of-the-largest-scientific-studies

Human Proteome Atlas (HPA) aims to map all human proteins using various omics technologies: https://www.proteinatlas.org/

SCALLOP consortium is a collaborative framework for discovery and follow-up of genetic associations with proteins on the Olink Proteomics platform: https://olink.com/our-community/scallop/

KARMA cohort is a prospective screening cohort for breast cancer in Sweden: https://karmastudy.org/ongoing-research/the-karma-cohort/

Swedish Twin Registry (referred as “Twin Gene cohort” in the podcast) is the largest of its kind, containing genetic information about ~87,000 twin pairs: https://ki.se/en/research/the-swedish-twin-registry

Additional published articles and books mentioned during the podcast:

Hood, Leroy and Price, Nathan. The Age of Scientific Wellness: Why the Future of Medicine Is Personalized, Predictive, Data-Rich, and in Your Hands, Cambridge, MA and London, England: Harvard University Press, 2023. https://doi.org/10.4159/9780674293465

Suhre K, McCarthy MI, Schwenk JM. Genetics meets proteomics: perspectives for large population-based studies. Nat Rev Genet. 2021 Jan;22(1):19-37. doi: 10.1038/s41576-020-0268-2. Epub 2020 Aug 28. PMID: 32860016. https://pubmed.ncbi.nlm.nih.gov/32860016/

Would you like to subscribe to the podcast on your favorite player or app? You can do so here:

Apple Podcasts: https://apple.co/3T0YbSm

Spotify Podcasts: https://open.spotify.com/show/2sZ2wxO...

Google Podcasts: https://podcasts.google.com/feed/aHR0...

Amazon Music: https://music.amazon.com/podcasts/d97...

Podcast Addict: https://podcastaddict.com/podcast/409...

Deezer:

  continue reading

25 episodes

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